ORIGINAL_ARTICLE
Genetic Diversity of Marrubium Species from Zagros Region (Iran), Using Inter Simple Sequence Repeat Molecular Marker
This study concerns the genetic diversity and taxonomic status of Marrubium species from central and south-west of Zagros region, Iran. It is investigated by Inter-Simple Sequence Repeat analysis. A total of 68 accessions from five Marrubium species were collected from their natural habitats. Molecular analysis was approved with 17 primers, of which 12 were carried out in the reaction mixture. Moreover, a data matrix was designed to estimate genetic parameters. To determine the genetic structure and taxonomic status, analysis of molecular variance, clustering analysis with UPGMA (Unweighted Pair Group Method Average) and the Jaccard similarity coefficient were estimated using NT-SYS-pc and Gene Alex software. Supplementary morphological evidences of calyx teeth features were also provided. The results of this study revealed that both sections Marrubium, Microdonta, and Ballota aucheri displayed a high percentage of polymorphism (PP=100%). In addition, their genetic diversity (Gst=0.99), number of effective alleles (Ne=1.53) and Shannon information index (I=0.51) showed a high percentage. Notably, all of the 12 primers produced reproducible bands. Analysis of molecular variance detected low quantities of gene variation among species (18%) from which high proportion of variation presented among populations within species (82%). Based on cluster analysis, M. cuneatum, M. vulgare and M. anisodon were definitely separated. Moreover, M. crassidens and M. vulgare were closely grouped. The calyx teeth features of M. cuneatum and M. crassidens revealed high variations which is consistent with molecular results. In conclusion, high genetic diversity in Marrubium species and accessions presents a valuable genetic resource in Zagros region, Iran.
https://jsciences.ut.ac.ir/article_64789_c2f26ebb9e319d860062ffb40cc76e17.pdf
2018-01-30
7
19
10.22059/jsciences.2018.64789
Genetic diversity
ISSR
Lamiaceae
Marrubium
N.
Salehi
1
Department of Botany, Faculty of Sciences, University of Shahrekord, Shahrekord, Islamic Republic of Iran
AUTHOR
N.
Kharazian
2
Department of Botany, Faculty of Sciences, University of Shahrekord, Shahrekord, Islamic Republic of Iran
LEAD_AUTHOR
B.
Shiran
3
Department of Plant Breeding, Faculty of Agriculture, University of Shahrekord, Shahrekord, Islamic Republic of Iran
AUTHOR
Abu-Asab M.S. and Cantino P.D. Systematic implications of pollen morphology in subfamilies Lamioideae and Pogostemonoideae. Ann. Mo. Bot. Gard. 81: 653-686 (1994).
1
Agostini G., Teixeira de Souza-Chies T. and Echeverrigaray S. Genetic diversity of Cunila incisa Benth. (Lamiaceae). Med. Aromatic Plants 1: 1-3 (2012).
2
Ahvazi M., Jamzad Z., Balali G.R. and Saeidi H. Trichome micro-morphology in Marrubium L. (Lamiaceae) in Iran and the role of environmental factors on their variation. Iran. J. Bot. 22: 39-58 (2016).
3
Akgul G., Ketenoglu O., Pinar N.M. and Kurt L. Pollen and seed morphology of the genus Marrubium (Lamiaceae) in Turkey. Ann. Bot. Fenn. 45: 1-10 (2008).
4
Ansari S.A., Narayanan C., Wali S.A., Kumar R., Shukla N. and Rahangdale S.K. ISSR markers for analysis of molecular diversity and genetic structure of Indian teak (Tectona grandis L.f.) populations. Ann. For. Res. 55:11–23 (2012).
5
Aytac Z., Akgul G. and Ekici M. A new species of Marrubium (Lamiaceae) from Central Anatolia, Turkey. Turk. J. Bot. 36: 443-449 (2012).
6
Badfar-Chaleshtori S., Shiran B., Kohgard M., Mommeni H., Hafizi A., Khodambashi M., Mirakhorli N. and Sorkheh K. Assessment of genetic diversity and structure of Imperial Crown (Fritillaria imperialis L.) populations in the Zagros region of Iran using AFLP, ISSR and RAPD markers and implications for its conservation. Biochem. Syst. Ecol. 42: 35–48 (2012).
7
Bentham G. Labiatarum Genera et Species. Ridgeway & Sons, London, 783 p. (1834).
8
Boissier P.E. Flora Orientalis. Regnum Academic Scientific, Basel, 1276 p. (1879).
9
Briquet J. Labiatae. In: Engler A. and Pran H.K. (Eds.), Die Naturlichen Pflanzenfamilien, W. Engelmann, Leipzig, pp.183-375 (1896).
10
Chen L., Chen F., He S. and Ma L. High genetic diversity and small genetic variation among populations of Magnolia wufengensis (Magnoliaceae), revealed by ISSR and SRAP markers. Electron. J. Biotechnol. 17: 268–274 (2014).
11
Cullen J. MarrubiumL. In: Davis P.H. (Ed.), Flora of Turkey and the Aegean Islands, Edinburgh Univ. Press, Edinburgh, pp. 165-178 (1982).
12
Dundar E., Akcicek E., Dirmenci T. and Akgun S. Phylogenetic analysis of the genus Stachys sect. Eriostomum (Lamiaceae) in Turkey based on nuclear ribosomal ITS sequences. Turk. J. Bot. 37: 14-23 (2013).
13
El Bardai S., Morel S., Wibo N., Faber M., Llabers N.G., Lyoussi B. and Uetin-Leclercq J. The vasorlaxant activity of murrabenol and marrubin from M. vulgare. Planta Med. 69: 75-77 (2003).
14
Erbano M., Schuhli G.S. and Pereira dos Santos E. Genetic Variability and Population Structure of Salvia lachnostachys: Implications for Breeding and Conservation Programs. Int. J. Mol. Sci. 16: 7839-7850. (2015).
15
Hou Y.C., Yan Z.H., Wei Y.M. and Zheng Y.L. Genetic diversity in barley from west China based on RAPD and ISSR analysis. Barley Genet. Newsl. 35: 9-22 (2005).
16
Jamzad Z. Lamiaceae. In: Asadi M., Masoumi A.A. and Mozafarian V. (Eds.), Flora Iran, Research Institute of Forest and Rangelands, Tehran, pp.152-251 (2012).
17
Karioti A., Heilmannb J. and Skaltsa H. Secondary Metabolites from Marrubium velutinum, Growing Wild in Greece. Z. Naturforsch. 60b: 328-332 (2005).
18
Khanuja S.P.S., Shasany A.K., Darokar M.P. and Kumar S. Rapid isolation of DNA from dry and fresh samples of plants producing large amounts of secondary metabolites and essential oils. Plant Mol. Biol. Rep. 17: 1-7 (1999).
19
Kharazian N., Rahimi S. and Shiran B. Genetic diversity and morphological variability of fifteen Stachys (Lamiaceae) species from Iran using morphological and ISSR molecular markers. Biologia 70: 438-452 (2015).
20
Kharazian N. and Hashemi M. Chemotaxonomy and morphological studies in five Marrubium L. species in Iran. Iran. J. Sci. Technol. 41: 17-31 (2017).
21
Knorring O.F. Marrubium L. In: Schischkin B.K. (Ed.), Flora of the USSR, Israel Program for Scientific Translations, Jerusalem, pp.155-165 (1954).
22
Kochieva E.Z., Khussein I.A., Legkobit M.P. and Khadeeva N.V. The detection of genome polymorphismin Stachys species using RAPD. Russ. J. Genet. 38: 516–520 (2002).
23
Kochieva E.Z., Ryzhova N.N., Legkobit M.P. and Khadeeva N.V. RAPD and ISSR analyses of species and populations of the genus Stachys. Russ. J. Genet. 42: 723–727 (2006).
24
Liu B. and Wendel J.F. Inter simple sequence repeat (ISSR) polymorphisms as a genetic marker system in cotton. Mol. Ecol. Notes. 1: 205-208 (2001).
25
Liu J., Wang L., Geng Y., Wang Q., Luo L. and Zhong Y.G. Genetic diversity and population structure of Lamiophlomis rotata (Lamiaceae), an endemic species of Qinghai–Tibet Plateau. Genetica 128: 385-394 (2006).
26
Mathiesen C., Scheen A.C. and Lindqvist C. Phylogeny and biogeography of the Lamioid genus Phlomis (Lamiaceae). Kew Bull. 66: 83-89 (2012).
27
Meimberg H., Abele T., Brauchler Ch., McKay J.K., Perez de Paz P.L. and Heubl G. Molecular evidence for adaptive radiation of Micromeria Benth. (Lamiaceae) on the Canary Islands as inferred from chloroplast and nuclear DNA sequences and ISSR fingerprint data. Mol. Phylogenet. Evol. 41: 566-578 (2006).
28
Milbourne D., Meyer R., Bradshaw J.E., Baird E., Bonar N., Provan J., Powell W. and Waugh R. Comparison of PCR based marker systems for the analysis of genetic relationships in cultivated potato. Mol. Breeding 3:127-136 (1997).
29
Moresco R.M., Maniglia T.C., De Oliveira C. and Margarido V.P. The pioneering use of ISSR (Inter Simple Sequence Repeat) in Neotropical anurans: preliminary assessment of genetic diversity in populations of Physalaemus cuvieri (Amphibia, Leiuperidae). Biol. Res. 46: 53-57 (2013).
30
Muhamed N.H. Anticancer activity of Marrubium alysson L. and its phenolic constituents. In: Awaad A.S., Govil J.N. and Singh V.K. (Eds.), Drug Plants, Stadium Press LLC, USA, pp.185-193 (2010).
31
Nei M. Analysis of gene diversity in subdivided populations. In: Proceeding of National Academic Sciences of the USA, pp. 3321-3323 (1973).
32
Peakall R. and Smouse P. Gen AlEx 6.5: Genetic analysis in Excel. Population genetic software for teaching and research – an update. Bioinformatics 28: 2537–2539 (2012).
33
Puppo P., Curto M., Gusmao-Guedes J., Cochofel J., Perez de Paz P.L., Brauchler C. and Meimberg H. Molecular phylogenetics of Micromeria (Lamiaceae) in the Canary Islands, diversification and inter-island colonization patterns inferred from nuclear genes. Mol. Phylogenet. Evol. 89: 160-70 (2015).
34
Rodrigues L., van den Berg C., Povoa O. and Monteiro A. Low genetic diversity and significant structuring in the endangered Mentha cervina populations and its implications for conservation. Biochem. Syst. Ecol. 50: 51-61 (2013).
35
Rohlf F.J. NTSYS-pc: Numerical Taxonomy and Multivariate Analysis System. Exeter software, Setauket, New York, ver. 2.1. (2000).
36
Saidi M., Movahedi K., Mehrabi A.A. and Kahrizi D. Molecular genetic diversity of Satureja bachtiarica. Mol. Biol. Rep. 40: 6501–6508 (2013).
37
Sajadi S., Shiran B., Kharazian N., Houshmand S. and Sorkheh K. Genetic diversity of Salvia species from Chaharmahal va Bakhtiari and Isfahan province using AFLP molecular markers. J. Hort. Sci. 40: 79-88 (2010).
38
Salmaki Y., Zarre S., Rydin O., Lindqvist C., Scheunert A., Brauchler C. and Heubl G. Phylogeny of the tribe Phlomideae with special focus on Eremostachys and Phlomioides: new insights from nuclear and chloroplast sequences. Taxon 61:161-179 (2012b).
39
Seybold S. Marrubium L.In: Rechinger K.H. (Ed.), Flora Iranica, Akademische Druck- und Verlagsanstalt, Graz, pp. 88-108 (1982).
40
Smolik M., Czak D.J. and Głowczyk A. Assessment of morphological and genetic variability in chosen Nepeta accessions. Herba Pol. J. 54: 68-78 (2008).
41
Song Z., Li X., Wang H. and Wang J. Genetic diversity and population structure of Salvia miltiorrhiza Bge. In China revealed by ISSR and SRAP. Genetica 138: 241-249 (2010).
42
Stankovic M.S. Total phenolic content, flavonoid concentration and antioxidant activity of Marrubium peregrinum L. extracts. Kragujevac J. Sci. 33: 63-72 (2011).
43
Tero N., Aspi J., Siikamaki P., Jakalaniemi A. and Tuomi J. Genetic structure and gene flow in a metapopulation of an endangered plant species, Silene tatarica. Mol. Ecol. 12: 2073-2085 (2003).
44
Wink M. and Kufmann M. Phylogenetic relationships between some members of the subfamily Lamioidae inferred from nucleotide sequence of the rbcl gene. Bot. Acta 109: 139-148 (1996).
45
Wu F.Q., Shen Sh.K., Zhang X.J., Wang Y.H. and Sun W.B. Genetic diversity and population structure of an extremely endangered species: the world’s largest Rhododendron. AoB Plants 7:1-9 (2014).
46
Yousefi Azarkhanian M., Asghari A., Ahmadi J., Asghari B. and Jafari A.A. Genetic diversity of Salvia species assessed by ISSR and RAPD markers. Not. Bot. Horti Agrobo. 44:431-436 (2016).
47
Yuzbasıoglu E. and Dadand M.Y. Phylogenetic relationships among species of the subsection Dendrophlomis Bentham. Electron. J. Biotechno. 11: 1-9 (2008).
48
Zaouali Y., Chograni H., Trimech R. and Boussaid M. Genetic diversity and population structure among Rosmarinus officinalis L. (Lamiaceae) varieties: var. typicus Batt. and var. troglodytorum Maire. based on multiple traits. Ind. Crop Prod. 38: 166-176 (2012).
49
Zaghloul M.S., Hamrick J.L., Moustafa A.A., Kamel W.M. and El-Ghareeb R. Genetic diversity within and among Sinai populations of three Ballota species (Lamiaceae). J. Hered. 97: 45-54 (2006).
50
ORIGINAL_ARTICLE
Novel Three-Step Synthesis of Imidazo[1,2-c]quinazoline-5(6H)-thione Derivatives
A novel synthesis of Iimidazo[1,2-c]quinazoline-5(6H)-thione framework was developed through a three-step reaction starting from benzil. The resulting (2-nitrophenyl)-4,5-diphenyl-1H-imidazole from the reaction of benzil and different 2-nitrobenzaldehyde, reduction of nitro group and then cyclization reaction with carbon disulfide (CS2). All steps were carried out under easy and user-friendly conditions in short time without using expensive catalysts or reagents.
https://jsciences.ut.ac.ir/article_64790_f8cde3a015a04678c0a9478a2861bcea.pdf
2018-01-30
21
25
10.22059/jsciences.2018.64790
Iimidazo[1,2-c]quinazoline-5(6H)-thione
Heterocycles
2-Nitrobenzaldehydes
Carbon disulfide (CS2)
S.
Nahavandian
1
Department of Chemistry, Faculty of Sciences, Mashhad Branch, Islamic Azad University, Mashhad, Islamic Republic of Iran
AUTHOR
S.
Allameh
2
Department of Chemistry, Faculty of Sciences, Mashhad Branch, Islamic Azad University, Mashhad, Islamic Republic of Iran
LEAD_AUTHOR
Dhami K. S., Arona S. S., Narang K. S. Thiopegan derivatives. XXIII. Synthesis of 5H-thiazolo[3,2-a]quinazolin-5-one and 5H-thiazolo[2,3-b]quinazolin-5-one derivatives containing phenolic, alkoxy, and alkyl Groups. J. Med. Chem. 6: 450-452 (1963).
1
Wenzel D. G. Anticonvulsant activity of some uracils and related compounds. J. Am. Pharm. Assoc. 44:550-553 (1955).
2
Hayao S., Havera H. J., Stryeker W. G., Leipzig T. J., Kulp R. A., Hartzler H. E. New sedative and hypotensive 3-substituted 2,4(1H,3H)-quinazolinediones. J. Med. Chem. 8: 807-811 (1965).
3
Chao Q., DengL., Shih H., Leoni L. M., Genini D., Carson D. A., Cottam H. B. Substituted Isoquinolines and Quinazolines as Potential Antiinflammatory Agents. Synthesis and Biological Evaluation of Inhibitors of Tumor Necrosis Factor α. J. Med. Chem.42: 3860-3873 (1999).
4
Witt A., Bergman J. Recent developments in the field of quinazoline chemistry. Curr. Org. Chem.7: 659-677 (2003).
5
Corbett J. W., Pan S., Markwalder J. A., Cordova B. C., Klabe R. M., Garber S., Rodgers J. D., Erickson-Viitanen S. K. 3,3-Dihydropyrano[4,3,2-d]quinazolin-2(1H)-ones are potent non-nucleoside reverse transcriptase inhibitors. Bioorg. Med. Chem. Lett. 11: 211-214 (2001).
6
Ma C., Li Y., Niu S., Zhang H., Liu X., Che Y. N-Hydroxypyridones phenylhydrazones, and a quinazolinone from Isaria farinose. J. Nat. Prod. 74: 32-37 (2011).
7
Nett M., Hertweck C. Farinamycin F. a quinazoline from Streptomyces griseus. J. Nat. Prod. 74: 2265-2268 (2011).
8
Bahekar R. H., Rao R. R. Synthesis, evaluation and structure-activity relationships of 5-alkyl-2,3-dihydroimidazo[1,2-c]quinazoline, 2,3-dihydroimidazo[1,2-c]quinazolin-5(6H)-thiones and their oxo-analogues as new potential bronchodilators. Arzneimittelforschung. 51: 284-292 (2001).
9
10. Bodtke A., Pfeiffer W. D., Görls H., Dollinger H., Langer, P. Synthesis of 5-thioxo-6H-imidazo[1,2-c]quinazolines and related compounds based on cyclocondensations of 2-isothiocyanatobenzonitrile (ITCB) with α-aminoketones. Tetrahedron. 63: 11287-11298 (2007).
10
11. Kamal A., Rao M. V., Rao A. B. Enzymatic cyclizations mediated by ultrasonically stimulated baker's yeast: synthesis of imidazo-fused heterocycles. J. Chem. Soc., Perkin Trans. 1: 2755-2757 (1990).
11
12. Khoza T. A., Makhafola T. J., Mphahlele M. J. Novel Polycarbo-Substituted Imidazo[1,2-c]quinazolines: Synthesis and Cytotoxicity Study. Molecules. 20: 22520-22533 (2015).
12
13. Wang M. M., Dou G. L., Shi D. Q. One-pot synthesis of imidazo[1,2-c]quinazoline-5(6H)-thione and imidazo[1,2-c]quinazolin-5(6H)-one with the aid of tin(II) chloride. J. Heterocycl. Chem. 46: 1364-1368 (2009).
13
14. El-Azab A. S., Al-Omar M. A., Abdel-Aziz A. A.-M., Abdel-Aziz N. I., El-Sayed M. A.-A., Aleisa A. M., Sayed-Ahmed M. M., Abdel-HamideS. G. Design, synthesis and biological evaluation of novel quinazoline derivatives as potential antitumor agents: Molecular docking study. Eur. J. Med. Chem. 45: 4188-4198 (2010).
14
15. Decker M. Novel inhibitors of acetyl- and butyrylcholinesterase derived from the alkaloids dehydroevodiamine and rutaecarpine. Eur. J. Med. Chem. 40: 305-313 (2005).
15
16. Mahdavi M., Asadi M., Saeedi M., Rezaei Z., Moghbel H., Foroumadi A., Shafiee A. Synthesis of novel 1,4-benzodiazepine-3,5-dione derivatives: reaction of 2-aminobenzamides under Bargellini reaction conditions. Synlett 23: 2521-2525 (2012).
16
17. Mahdavi M., Asadi M., Saeedi M., Ebrahimi M., Rasouli M. A., Ranjbar P. R., Foroumadi A., Shafiee A. One-Pot four-component synthesis of novel imidazo[2,1-b]thiazol-5-amine derivatives. Synthesis44: 3649-3654 (2012).
17
18. Azizmohammadi M., Khoobi M., Ramazani A., Emami S., Zarrin A., Firuzi O., Miri R., ShafieeA. 2H-Chromene derivatives bearing thiazolidine-2,4-dione, rhodanine or hydantoin moieties as potential anticancer agents. Eur. J. Med. Chem. 59: 15-22 (2013).
18
19. Mahdavi M., Asadi M., Saeedi M., Tehrani M. H., Mirfazli S. S., Shafiee A., Foroumadi A. Green synthesis of new boron-containing quinazolinones: preparation of benzo[d][1,3,2]diazaborinin-4(1H)-one derivatives. Synth. Commun.45: 672-675 (2012).
19
20. Rezayati S., Mehmannavaz M., Salehi E., Haghi S., Hajinasiri R., Afshari Sharif Abad S. Phospho Sulfonic Acid Catalyzed Synthesis of Benzimidazole, Benzoxazole and Quinoxaline Derivatives under Green Solvent at Ambient Temperature. J. Sci. I. R. Iran 27: 51-63 (2016).
20
21. Taghizadeh M. J., Salahi F., Hamzelooian M., Jadidi K. Regioselectivie Synthesis of New Spiro-Oxindolopyrrolidines via a Three-Component Asymmetric 1,3-Dipolar Cycloaddition Reaction of Azomethine Ylides aAnd Chiral Menthyl Cinnamate. J. Sci. I. R. Iran 26: 25-33 (2015).
21
22. Clark R. H., Wagner E. C. Isatoic anhydride. I. Reactions with primary and secondary amines and with some amides. J. Org. Chem. 9: 55-67 (1944).
22
23. Wang S., Yin S., Xia, S., Shi, Y., Tu, S., Rong, L. An efficient synthesis of 3-benzylquinazolin-4(1H)-one derivatives under catalyst-free and solvent-free conditions. Green Chem. Lett. Rev. 5: 603-607 (2009).
23
ORIGINAL_ARTICLE
Enhanced Oxidation of Azo Dye Using Ag-SiO2 Nanoparticle and Peroxydisulfate and Kinetic Study
Present work investigates the capability of oxidative treatment process in the presence of nano silver doped on silicate particles for decolorization of a widely used azo dye, C.I. Direct Blue 129 (DB129) in water samples. Solutions with initial concentration of 20 mgL-1 of dye, within the range of generic concentration in textile wastewaters, were treated under ambient conditions of initial pH of 6.7 and temperature of 25ºc. The operational parameters evaluation including dye and peroxydisulfate concentration, initial pH, nanoparticles dosage and reaction time was studied in an endeavor to reach the higher dye removal efficiency. Subsequently, a removal more than 90% of dye was attained by applying the optimal operational conditions as follow: 0.4 g of catalyst, 20 mgL-1 of dye, 5 mM of peroxydisulfate and initial pH of 6.7 in 35 min. Moreover, kinetic study for various parameters in several conditions for treatment process was investigated. Pseudo- first-order reaction rate constants were calculated for the systems. The morphology and crystal structure of Ag-SiO2 nanoparticles were characterized by means of Transmission Electron Microscope (TEM).
https://jsciences.ut.ac.ir/article_64792_a26150cf838964667bcd821d71bd0d0d.pdf
2018-01-30
27
34
10.22059/jsciences.2018.64792
Nano silver
Direct Blue 129
Peroxydisulfate
Kinetic
degradation
M. H.
Rasoulifard
1
Water and wastewater treatment research laboratory, Department of chemistry, Faculty of science, University of Zanjan, Zanjan, Islamic Republic of Iran
LEAD_AUTHOR
N.
Abbasioun
2
Water and wastewater treatment research laboratory, Department of chemistry, Faculty of science, University of Zanjan, Zanjan, Islamic Republic of Iran
AUTHOR
L.
Ghalamchi
3
Water and wastewater treatment research laboratory, Department of chemistry, Faculty of science, University of Zanjan, Zanjan, Islamic Republic of Iran
AUTHOR
1. Ma J., Ding Z., Wei G., Zhao H and Huang T., Sources of water pollution and evolution of water quality in the Wuwei basin of Shiyang river. J. Environ. Manage. 90: 1168-1177 (2009).
1
2. Deblonde T and Hartemann P., Environmental impact of medical prescriptions: assessing the risks and hazards of persistence, bioaccumulation and toxicity of pharmaceuticals. Public. Health. 127:312-317 (2013).
2
3. Yagub M. T., Sen T. K., Afroze S and Ang H. M., Dye and its removal from aqueous solution by adsorption: a review. Adv. Colloid. Interface. Sci. 209:172-184 (2014).
3
4. Bokare A. D and Choi W., Review of iron-free Fenton-like systems for activating H2O2 in advanced oxidation processes. J. Hazard. Mater. 275:121-135 (2014).
4
5. Eskandarian M., Mahdizadeh F., Ghalamchi L and Naghavi S., Bio-Fenton process for Acid Blue 113 textile azo dye decolorization: characteristics and neural network modeling. Desalin. Water. Treat. 52: 4990-4998 (2014).
5
6. Dawood S and Sen T. K., Removal of anionic dye Congo red from aqueous solution by raw pine and acid-treated pine cone powder as adsorbent: equilibrium, thermodynamic, kinetics, mechanism and process design. Water. Res. 46: 1933-1946 (2012).
6
7. Li H., Li Y., Xiang L., Huang Q., Qiu J., Zhang H., ... and Valange S., Heterogeneous photo-Fenton decolorization of Orange II over Al-pillared Fe-smectite: response surface approach, degradation pathway, and toxicity evaluation. J. Hazard. Mater. 287: 32-41 (2015).
7
8. Shih Y J., Putra W N., Huang Y H and Tsai J C., Mineralization and deflourization of 2,2,3,3-tetrafluoro-1-propanol (TFP) by UV/persulfate oxidation and sequential adsorption. Chemosphere. 89: 1262-1266 (2012).
8
9. Sohrabi V., Ross M. S., Martin J. W and Barker J. F., Potential for in situ chemical oxidation of acid extractable organics in oil sands process affected groundwater. Chemosphere. 93: 2698-2703 (2013).
9
10. Gu X., Lu S., Qiu Z., Sui Q., Miao Z., Lin, K., ... and Luo Q., Comparison of photodegradation performance of 1, 1, 1-trichloroethane in aqueous solution with the addition of H2O2 or S2O82–oxidants. Ind. Eng. Chem. Res. 51: 7196-7204 (2012).
10
11. Rasoulifard M H., Marandi R., Majidzadeh H and Bagheri I., Ultraviolet Light-Emitting Diodes and Peroxydisulfate for Degradation of Basic Red 46 from Contaminated Water. Environ. Eng. Sci. 28: 229-235 (2011).
11
12. Rasoulifard M. H., Ghalamchi L., Azizi M., Eskandarian M. R and Sehati. N., Application of Ultraviolet Light-Emitting Diodes to the Removal of Cefixime Trihydrate from Aqueous Solution in the Presence of Peroxydisulfate. J. Appl. Chem. Res. 9: 61-72 (2015).
12
13. Li Y., Li H., Zhang J., Quan G and Lan Y., Efficient Degradation of Congo Red by Sodium Persulfate Activated with Zero-Valent Zinc. Water. Air. Soil. Pollut. 225: 1-8 (2014).
13
14. Salari D., Daneshvar N., Niaei A., Aber S and Rasoulifard M., The photo-oxidative destruction of C.I. Basic Yellow 2 using UV/S2O82−process in an annular photoreactor. J. Environ. Sci. Health. Part A. 43: 657-663 (2008).
14
15. Vicente F., Santos A., Romero A and Rodriguez S., Kinetic study of diuron oxidation and mineralization by persulphate: Effects of temperature, oxidant concentration and iron dosage method. Chem. Eng. J. 170:127-135 (2011).
15
16. Gong Y and Lin L., Oxidative decarboxylation of levulinic acid by silver (i) /persulfate. Molecules. 16: 2714-2725 (2011).
16
17. Rasoulifard M. H., Doust Mohammadi S. M. M., Heidari A and Farhangnia E., Degradation of acid red 14 by silver ion-catalyzed peroxydisulfate oxidation in an aqueous solution. Turk. J. Eng. Environ. Sci. 36: 73-80 (2012).
17
18. Zhang N., Kong X., Zhang M and Zhu Y., Study on treatment of methyl-orange in water by derivable oxidation of peroxydisulfate. J. Adv. Oxid. Tech. 10:193-195 (2007).
18
19. Rasoulifard M., Fazli M and Eskandarian M. R., Kinetic study for photocatalytic degradation of direct red 23 in UV–LED/nano-TiO2/S2O82− process: dependence of degradation kinetic on operational parameters. J. Ind. Eng. Chem. 20: 3695-3702 (2014).
19
20. Saien J., Ojaghloo Z., Soleymani A. R and Rasoulifard M. H., Homogeneous and heterogeneous AOPs for rapid degradation of Triton X-100 in aqueous media via UV light, nano titania hydrogen peroxide and potassium persulfate. Chem. Eng. J. 167: 172-182 (2011).
20
21. Yan J., Lei M., Zhu L., Anjum M. N., Zou J and Tang H., Degradation of sulfamonomethoxine with Fe3O4 magnetic nanoparticles as heterogeneous activator of persulfate. J. Hazard. Mater. 186: 1398-1404 (2011).
21
22. Xu X. R and Li X. Z., Degradation of azo dye Orange G in aqueous solutions by persulfate with ferrous ion. Sep. Purif. Technol. 72: 105-111 (2010).
22
23. Devi P., Das U and Dalai A. K., In-situ chemical oxidation: Principle and applications of peroxide and persulfate treatments in wastewater systems. Sci. The Total. Environ. 571: 643-657 (2016).
23
ORIGINAL_ARTICLE
Chronostratigrahy of Acritarchs and Chitinozoans from upper Ordovician Strata from the Robat-e Gharabil Area, NE Alborz Mountains, Northern Khorassan Province: Stratigraphic and Paleogeographic Implications
The Palaeozoic rock units mainly, Ghelli, Niur, Padeha, Khoshyeilagh and Mobark formations are well-exposed in the north of Robat-e Gharabil village. 116 out of 157 surface samples were analyzed to determine aged relationships of Ghelli Formation. The samples of Ghelli Formation are dominated by acritarchs (42 species belonging to 23 genera) and chitinozoans (26 species distributing among 15 genera). Two new acritarch species are introduced, consisting of Goniosphaeridium iranense n.sp., and Goniosphaeridium persianense n. sp. Based on the restricted stratigraphic range of chitinozoan species, Late Ordovician (Ashgill) age is assigned to the Ghelli Formation. On the other hand, the presence of diagnostic chitinozoan taxa in the Ghelli Formation consisting of Armoricochitina nigerica, Ancyrochitina merga, and Spinachitina oulebsiri chitinozoan biozones, suggest a clear palaeobiogeographic affinity between NE Alborz Mountain and North Gondwana Domain. The presence of some chitinozoan and acritarch taxa from the Baltic and Laurentia in Gondwanan chitinozoan biozones of the Robat-e Gharabil area suggests the existence of counter-clockwise marine currents that resulted in bringing planktonic organisms (acritarchs and chitinozoans) from lower latitudes (Baltica) to higher latitudes (Northern Gondwanan Domain) settings.
https://jsciences.ut.ac.ir/article_64793_09096c78e8deadd1a97344773d9fa47a.pdf
2018-01-30
35
51
10.22059/jsciences.2018.64793
Acritarchs
Chitinozoans
Biostratigraphy
NE Alborz Mountain
Northeastern Iran
M.
Ghavidel-Syooki
1
Institute of Petroleum Engineering, Faculty of Engineering, University of Tehran, Tehran, Islamic Republic of Iran
LEAD_AUTHOR
S.
Borji
2
Department of Geology, Faculty of Sciences, North Tehran branch, Islamic Azad University, Tehran, Islamic Republic of Iran
AUTHOR
Abuhmida F., Palynological analysis of the Ordovician to Lower Silurian sediments from the Murzuq Basin, southwest Libya. Ph. D thesis, University of Sheffield Department of Animal and Plant Sciences, 641p (2013).
1
Achab A., Sur quelques chitinozoaires de la Formation de Vauréal et de la Formation de Macasty (Ordovicien supérieur); lie d'Anticosti, Québec, Canada. Rev. Palaeobot. Palynol. 25: 295-314 (1978).
2
Afshar-Harb A., The stratigraphy, tectonic and petroleum geology of Kopet Dagh region. Unpublished Ph. D. thesis, Imperial College of Sciences and Technology, University of London, 316p (1979).
3
Al-Ameri T., and Wicander R., An assessment of the gas generation potential of the Ordovician Khabour Formation, Western Iraq. Comunicações Geológicas, T. 95: 157–166 (2008).
4
Bourahrouh A., Paris F., Elaouad-Debbaj Z., Biostratigraphy, biodiversity and palaeoenvironments of the chitinozoans and associated palynomorphs from the Upper Ordovician of the Anti-Atlas, Morocco, Rev. Palaeobot. Palynol. 130:17-40 (2004).
5
Butcher A., Early Llandovery Chitinozoans from Jordan. Palaeontol. 52: 593-629 (2009).
6
Cramer F. H., Distribution of selected Silurian acritarchs. Rev. españ. Micropaléont, plates I–XXIII. 1: 1–203 (1971).
7
Elaouad-Debbaj Z., Chitinozoaires de la formation du Ktaoua inférieur de l’Anti-Atlas (Morac). Hercynica 2: 35-55 (1986).
8
Eisenack A., Neue Mikrofossilien des baltischen Silurs 1. Paläontol. Z. 13: 74–118 (1931).
9
Eisenack A., Chitinozoen, Hystrichosphäeren und andere Mikrofossilien aus dem Beyrichia Kalk. Senckenbergiana lethaea, 36: 157-188 (1955).
10
Eisenack A., Neotypen baltischer Silur-Chitinozoen und neue Arten. N. Jb. Geol. Paläontol Abh. 108: 1-20 (1959).
11
Foster C., and Wicander R., An Early Ordovician organic-walled microphytoplankton assemblage from the Nambeet Formation, Canning Basin, Australia: biostratigraphic and paleogeographic significance. Palynology, 1-31 (2015).
12
Fensome R. A., Williams G. L., Barss M. S., Freeman J. M., Hill J. M., Acritarchs and fossil prasinophyte: an index to genera, species, infraspecific taxa. AASP. Contrib. Ser. 25: 1-771 (1990).
13
Ghavidel-Syooki M., Palynostratigraphy and Paleobiogeography of lower Palaeozoic strata in the Ghelli area, northeastern Iran (Kopet-Dagh Region).J.Sci.I.R.Iran, 11(4):305-318 (2000).
14
Ghavidel-Syooki M., Palynostratigraphy and Palaeogeography of the Upper Ordovician Gorgan Schists (Southeastern Caspian Sea), Eastern Alborz Mountain Ranges, Northern Iran. Comunicações Geológicas, t. 95: 123-155 (2008).
15
Ghavidel-Syooki M., Cryptospore and trilete spore assemblages from the Late Ordovician (Katian–Hirnantian) Ghelli Formation, Alborz Mountain Range, Northeastern Iran: Palaeophytogeographic and palaeoclimatic implications. Rev. Palaeobot. Palynol. 231: 48–71 (2016).
16
Ghavidel-Syooki M., and Winchester-Seeto, T., Biostratigraphy and Palaeogeography of Late Ordovician chitinozoans from the north-eastern Alborz Range, Iran. Rev. Palaeobot. Palynol. 118: 77-99 (2002).
17
Ghavidel-Syooki M., Hassanzadeh, J., and Vecoli, M., Palynology and isotope geochronology of the Upper Ordovician–Silurian successions (Ghelli and Soltan Maidan Formations) in the Khoshyeilagh area, eastern Alborz Range, northern Iran; stratigraphic and palaeogeographic implications. Rev. Palaeobot. Palynol. 164: 251–271 (2011a).
18
Ghavidel-Syooki M., Álvaro, J.J., Popov, L., Ghobadi Pour, M., Ehsani, M.H., and Suyarkova, A., Stratigraphic evidence for the Hirnantian (latest Ordovician) glaciation in the Zagros Mountains, Iran. Palaeogeogr. Palaeoclimatol. Palaeoecol. 307: 1–16 (2011b).
19
Ghavidel-Syooki M., Biostratigraphy of Acritarchs and Chitinozoans in Ordovician Strata from the Fazel Abad Area, Southeastern Caspian Sea, Alborz Mountains, Northern Iran: Stratigraphic Implications. J. Sci. I. R. Iran. 28(1): 37 - 57 (2017).
20
Górka H., Acritarches et Prasinophyceae de l’ordovicien Moyen (Viruen) de sondage de Smedsby Gard no. 1 (Gotland, Sue`de). Rev. Palaeobot. Palynol. 52: 257-297 (1987).
21
Greuter W.F.R., Barrie H.M., Burdet W.G., Chaloner V., DeMoulin D.L., Hawksworth P.M., Jφrgensen J., McNeil D.H., Nicolson P.C.S., Trehane P., International code of botanical nomenclature (Tokyo Code). Regnum Vegetable, 131. Koeltz Scientific Books, Königstein. 389 pp (1994).
22
Hill P.J., and Molyneux, S.G., Palynostratigraphy, palynofacies and provincialism of Late Ordovician–Early Silurian acritarchs from northeast Libya. In: El-Arnauti, A., Owens, B., Thusu, B. (Eds.), Subsurface Palynostratigraphy of Northeast Libya. Garyounis University Publications, Benghazi, Libya, pp. 27–43 (1988).
23
Jachowicz M., Ordovician acritarchs from central and northwestern Saudi Arabia. Rev. Palaeobot. Palynol. 89: 19-25 (1995).
24
Jacobson S.R., and Achab A., Acritarchs biostratigraphy of the Dicellograptus complanatus graptolite Zone from the Vaureal Formation (Ashgillian) Anticosti Isleland, Quebec, Canada. Palynology 9: 165–198 (1985).
25
Jansonius J., Morphology and classification of some Chitinozoa. Bull. Canad. Pet. Geologists, 12: 901-918 (1964).
26
Jenkins W.A.M., Chitinozoa from the Ordovician Sylvan Shale of the Arbuckle Mountains, Oklahoma. Palaeontology 13: 261–288 (1970).
27
Keegan J.B., Rasul S.M., Shaheen Y., Palynostratigraphy of the Lower Palaeozoic, Cambrian to Silurian, sediments of Hashemite Kingdom of Jordan. Rev. Palaeobot. Palynol. 45: 167–180 (1990).
28
Le Hérissé A., Molyneux S.G., Miller M.A., Late Ordovician to early Silurian acritarchs from the Qusaiba-1 shallow core hole, central Saudi Arabia. Rev. Palaeobot. Palynol. 212: 22-59 (2014).
29
Le Hérissé A., Paris F., Steemans P., Late Ordovician–earliest Silurian palynomorphs from northern Chad and correlation with contemporaneous deposits of southeastern Libya. Bull. Geosci. 88: 483–504 (2013).
30
Le Heron D. P., Khoukhi Y., Paris F., Ghienne J.F., Le Hérissé A., Black shale, grey shale, fossils and glaciers: Anatomy of the Upper Ordovician-Silurian succession in the Tazzeka Massif of eastern Morocco. Gondwana Research 14: 483-496 (2008).
31
Li J., Wicander R., Yan K., Zhu H., An Upper Ordovician acritarch and prasinophyte assemblage from Dawangou, Xinjiang, northwestern China: biostratigraphics and paleogeographics implication. Rev. Palaeobot. Palynol. 139: 97-128 (2016).
32
Loeblich A. R., Jr., and Tappan H., Some Middle and Late Ordovician microphytoplankton from Central North America. J. Paleontol. 52: 1233-1287 (1978).
33
Martin F., and Yin L. M., Ordovicien supérieur et Silurien inférieur à Deerlijk (Belgium). Palynofacies et microfacies. Mem. Inst. r. Sci. nat. Belgique, Brussels, 174: 1-71 (1988).
34
Miller M. A., Paniculaferum missouriensis gen. et sp. nov., a new Upper Ordovician acritarch from Missouri, U.S.A. Rev. Palaeobot. Palynol. 70: 17-223 (1991).
35
Oulebsir L., and Paris F., Chitinozoaires ordoviciens du Sahara algérien: biostratigraphie et affinités paléogéographiques. Rev. Palaeobot. Palynol. 86: 49-68 (1995).
36
Paris F., The Ordovician Biozones of the North Gondwana Domain. Rev. Palaeobot. Palynol. 66: 181-209 (1990).
37
Paris F., Les chitinozoaires dans le Paléozoïque du sud-ouest de l‟Europe (cadre géologique-étude systématique-biostratigraphie). Mém. Soc. géol. mineral. Bretagne, 26: 1-496 (1981).
38
Paris F., Grahn Y., Nestor Y., Lakova I., A revised chitinozoan classification. J. Paleontol. 73(4): 549-570 (1999).
39
Paris F., Verniers J., Al-Hajri S., Ordovician chitinozoan from Central Saudi Arabia. In: Al-Hajri, S., Owens, B. (Eds.), Stratigraphic Palynology of the Palaeozoic of Saudi Arabia. Special GeoArabia Publication, Gulf PetroLink, Bahrain, 1: 42–56 (2000b).
40
Paris F., Le Hérissé A., Monod O., Kozlu H., Ghienne J.F., Dean W.T., Vecoli M., Günay Y., Ordovician chitinozoans and acritarchs from southern and southeastern Turkey. Rev. Micropaleontol. 50: 81–107 (2007).
41
Paris F., Verniers J., Miller M.A., Al-Hajri S., Melvin J., Wellman C.H., Late Ordovician–earliest Silurian chitinozoans from the Qusaiba-1 core hole (North Central Saudi Arabia) and their relation to the Hirnantian glaciation. Rev. Palaeobot. Palynol 212: 60-84 (2015).
42
Raevskaya E., and Servais T., Ninadiacrodium: A new Late Cambrian acritarch genus and index fossil. Palynology, 33 (1): 219–239 (2009).
43
Rasul S.M., Acritarch zonation of Tremadoc Series of Shinetone Shales, Wrekin, Shropshire. Palynology, 3: 53-72 (1979).
44
Soufiane A., and Achab A., Upper Ordovician and Lower Silurian chitinozoans from central Nevada and Arctic Canada . Rev. Palaeobot. Palynol. 113: 165-187 (2000).
45
Staplin F. L., Jansonius J. Pocock S. A. J., Evaluation of some acritarcheous hystrichosphere genera. N. Jb. Geol. Paläontol. Abh. 123: 167-201 (1965).
46
Webby B. D., Paris F., Droser M. L., Percival I. G., The Great Ordovician Biodiversification Event. Columbia University Press. New York, 1-37 (2004).
47
Wicander R., Playford G., Robertson E.B., Stratigraphic and paleogeographic significance of an Upper Ordovician acritarch flora from the Maquoketa Shale, northeastern Missouri, USA. Paleontol. Soc. Mem. 73 (6): 1-38 pp (1999).
48
Vandenbroucke T.R.A., Upper Ordovician chitinozoans from the type area in the U.K. Monograph of the Palaeontological Society of London, 161 (628): 1–113 (2008).
49
Van Nieuwenhove N., Vanderbroucke T. R. A., Verniers, J., The Chitinozoan biostratigraphy of the Upper Ordovician Greenscoe section, southern Lake District, UK. Rev. Palaeobot. Palynol. 139: 151-169 (2006).
50
Vanmeirhaeghe J., Chitinozoan biostratigraphy of the Upper Ordovician of Faulx-les-Tombes (central Condroz Inlier, Belgium). Rev. Palaeobot. Palynol. 139: 171-188 (2006).
51
Vavrdova M., Further acritarchs and terrestrial plant remains from the Late Ordovician at Hlasna Treban (Czechoslovakia). Čas. Mineral. Geol. 33: 1-10 (1988). Praha.
52
Vecoli M., and Le Herisse A., Biostratigraphy, taxonomic diversity, and patterns of morphological evolution of Ordovician acritarchs (organic-walled microphytoplankton) from the northern Gondwana margin in relation to 497 palaeoclimatic and palaeogeographic changes, Earth-Science Reviews 67: 267-311 (2004).
53
ORIGINAL_ARTICLE
Origin of Lherzolitic Peridotites in Ab-Bid Ultramafic Complex (Hormozgan Province); Products of Mantle Metasomatism or Partial Melting Processes?
Lherzolite is one of the main units in the Ab-Bid ultramafic complex from Esfandagheh-HadjiAbad coloured mélange (South of Iran). The complex contains harzburgite, dunite, lherzolite and pyroxenite dykes and the lherzolites mainly occur in the margins. In the field, lherzolites occur as weakly foliated coarse-grained peridotites with shiny pyroxene grains and cut by neumerous pyroxenitic veins. Textural features such as elongation and undoluse extinction of minerals and porphyroclastic grains indicate that the lherzolites were part of the upper mantle and experienced high P-T deformational events. Mineral chemistry data such as Cr# values in spinels (10/33-14/04) and fo contents of olivines (90/49-93/51) from the Ab-Bid lherzolites suggest that these rocks belong to the mantle. Evidences such as CaO (1/18-3/23) and MgO (39/53-43/65) contents of whole rock compositions, Cr# (10/33-14/04) and Mg# (74/20-78) values of spinels, besides textural features and REE normalized patterns show that they have past a complex petrological history. At the first stage, they have partially melted (< 10%) in an abyssal environment, then, they refertilized by ascending melts and enriched in LREE. Tectonomagmatic discrimination diagrams indicate that Ab-Bid lherzolites belong to the abyssal peridotites and their petrogenetic evolutions are similar to those from MOR type peridotites. Our data document the dependence of Esfandagheh-HadjiAbad coloured mélange to the Neotethyan oceanic lithosphere in the south of Iran.
https://jsciences.ut.ac.ir/article_64794_da3038193f0be09e10db44d453031843.pdf
2018-01-30
53
65
10.22059/jsciences.2018.64794
Ab-Bid ultramafic complex
Esfandagheh-HadjiAbad coloured mélange
Hormozgan Province
Lherzolite
Mantle metasomatism
M.
Mohammadi
1
Department of Geology, Faculty of of Sciences , University of Shahid Bahonar, Kerman, Islamic Republic of Iran
LEAD_AUTHOR
H.
Ahmadipour
2
Department of Geology, Faculty of of Sciences , University of Shahid Bahonar, Kerman, Islamic Republic of Iran
AUTHOR
A.
Moradian
3
Department of Geology, Faculty of of Sciences , University of Shahid Bahonar, Kerman, Islamic Republic of Iran
AUTHOR
1. Alavi N.M. Tectonic of the Zagros, orognic belt of Iran, new data and interpretation. Tectonophysics 299: 211-238(1984).
1
2. Azizian H., Naderi N., Navazi M., Posht Kohii M., Rashidi H. 1/100000 level Dolat – Abad Geological map Geol. Sur. & Mineral. explor. Iran. Ser. 346 (2007).
2
3. Bedard E., Hebert R., Guilmetta C., Lesage G., Wang C.S., Dostal J. Petrology and geochemistry of the sega and sangsang ophiolitic massifs, Yarlung Zangbo Suture Zone, Southern Tibet: Evidence for an arc-back-arc origin. Lithos 113:48-67 (2009).
3
4. Beyer E.E., Griffin W.L., O/Reilly S.Y. Transformation of Archean lithospheric mantle by refertilization: evidence from exposed peridotites in the Western Gneiss Region, Norway. J. petrol 47: 1611-1636(2006).
4
5. Bodinier J.L., Godard M. Orogenic, Ophiolitic and Abyssal Peridotites. In: Carlson, R.W. (Ed.), Treatise. Geochem. Els. Sci. Ltd 2: 103-170 (2003).
5
6. Canil D. Mildly incompatible elemant in peridotite and the origins of mantle lithosphere. Lithos 77: 375-393(2004).
6
7. Canil D., Johnston S.T., Mihalynuk M. Mantle redox in Cordilleran ophiolites as a record of oxygen fugacity during partial melting and the lifetime of mantle lithosphere. Earth. Planet. Sci. let 248: 41-102(2006).
7
8. Carswell D.A. Picritic magma-residul dunite relationship in garnet peridotite at Kalskaret near Tafjord, south Norway. Contrib. Mineral. Petrol 19: 97-124(1968).
8
9. Dawson J.B. A fertile harzburgite-garnet lherzolite transition: possible inferences for the roles of strain and metasomatism in upper mantle peridotites. Lithos 77: 553-569(2004).
9
10. Dick H.J.B., Bullen T. Chromian spinel as a petrogenetic indicator in abyssal and alpine-type peridotites and spatially associated lavas. Contrib. Mineral. Petrol 86: 54–76(1984).
10
11. Dilek Y. & Thy P. Island arc tholeiite to boninitic melt evolution of the Cretaceous Kızıldağ (Turkey) ophiolite model for multistage early arc–forearc magmatism in Tethyan subduction factories. Lithos113: 68–87(2009).
11
12. Hawkins J.W. and Allen J.F. Petrologic evolution of the Lau Basin, site 834-839, in proc. ODP.Sci. Results 135:.J.W(1994).
12
13. Herzberg C. Geodynamic information in peridotite petrology. J. Petrol 45: 2507–2530(2004).
13
14. Hirose K., Kawamoto T. Hydrous partial melting of lherzolite at 1GPa: the effect of H2O on the genesis of basaltic magmas. Earth. Planet. Sci. Lett 133: 463–473(1995).
14
15. Kamenetsky V.S., Crawford A.J., Meffre S. Factors controlling chemistry of magmatic spinel: an empirical study of associated olivine, Cr-spinel and melt inclusions from primitive rocks. J. Petrol 42: 655–671(2001).
15
16. Kepezhinskas P.K., Defant M.J., Drummond M.S. Na metasomatism in the island-arc mantle by slab melt-peridotite interaction: evidence from mantle xenoliths in the North Kamchatka arc. J. Petrol 36: 1505–1527(1995).
16
17. Lenoir X., Garrido C.J., Bodinier J.L., Dautria J.M., Gervilla F. The recrystallization front of the Ronda peridotite: evidence for melting and thermal erosion of subcontinental lithospheric mantle beneath the Alboran Basin. J. Petrol 42: 141–158(2001).
17
18. McDonough W.F., Sun S.S. The composition of the Earth. Chem. Geol 12: 223–253(1995).
18
19. Medaris L.G. High-pressure peridotites in south-western Oregon. Bull.Geologic. Soc.Am 83: 41– 58(1972).
19
20. Mohajjel M., Fergusson C.I. and Shahandi M.R. Cretaceous Tertiary convergence and continental collision. Sanandaj-Sirjan zone, westeren Iran: J. Asian. Earth. Sci 21: 397-412(2003).
20
21. Müntener O., Pettke T., Desmurs L., Meier M., Schaltegger U. Trace element and Nd-isotopic evidence and implications for crust-mantle relationships. Earth. Planet. Sci. Lett 221: 293–308(2004).
21
22. Orberger B., Lorand J.P., Girardeau J., Mercier J.C.C. and Pitragool S. Petrogenesis of ultramafic rocks and associated chromitites in the Nan Uttardit ophiolite, Northern Thailand. Lithos 35: 153-182(1995).
22
23. Pagé P., Bédard J.H., Tremblay A. Geochemical variations in a depleted fore-arc mantle: The Ordovician Thetford Mines Ophiolite. Lithos 113: 21–47(2009).
23
24. Parlak O., Rızaoğlu T., Bağcı U., Karaoğlan F. & Hock V. Tectonic significance of the geochemistry and petrology of ophiolites in southeast Anatolia Turkey. Tectonophysic473:173–187(2009).
24
25. Parkinson I.J., Pearce J.A. Peridotites from the Izu–Bonin–Mariana forearc (ODP leg 125): evidence for mantle melting and melt–mantle interaction in the supra-subduction zone setting. J. Petrol 39: 1577–1618(1998).
25
26. Pearce J.A., Barker P.F., Edwards S.J., Parkinson I.J., Leat P.T. Geochemistry and tectonic significance of peridotites from the South Sandwich arc–basin system, South Atlantic. Contrib. Mineral. Petrol 139: 36–53(2000).
26
27. Peighambari S., Ahmadipour H., Stosch H.G., Daliran F. Evidence for multi–stage mantle metasomatism at the Dehsheikh peridotite massif and chromite deposits of the Orzuieh coloured mélange belt, Southeasten Iran. Ore. Geol. Rev 39: 245-264(2011).
27
28. Piccardo G.B., Muntener O., Zanetti A., Romarione A., Bruzzone S., Poggi E. & Spagnolo G. The Lenzo South Peridotite: melt/peridotite interaction in the mantle lithosphere of the Jurassic Ligurian Tethys. Ofioliti 29: 37-62(2004).
28
29.Santos J.F., Scharer U., Ibarguchi J.I.G. and Girardeau J. Genesis of pyroxenite-rich peridotite at Cabo Ortegal (NW Spain):geochemical and Pb-Sr-Nd isotope data. J. Petrol 43: 17-43(2002).
29
30. Seyler M., Lorand J.–P., Dick H.J.B., Drouin M. Pervasive melt percolation reactions in ultra-depleted refractory harzburgites at the Mid-Atlantic Ridge, 15_ 20◦N: ODP Hole 1274. Contrib. Mineral. Petrol 153(3): 303–319(2007).
30
31. Shahabpour J. Tectonic evolution of the orogenic belt in the region located between Kerman and Neyriz. J. Asian. Earth. Sci 24: 405–417 (2005). 32. Shafaii Moghadam H., Stern R.J., Rahgoshay M. The Dehshir ophiolite (Central Iran): Geochemical constraints on the origin and evolution of the Inner–Zagros ophiolite belt. Bull. Geologic. Soc. AM 122: 1516-1547(2010).
31
33. Shafaii Moghadam H., Stern R.J., Chiaradia M. Geochemistry and tectonic evolution of the Late Cretaceous Gogher- Bft ophiolite, central Iran. Lithos 168-169:33-47(2013).
32
34. Sobolev A.V. & Danyushevsky L.V. Petrology and geochemistry of boninites from the north termination of the Tonga trench: constraints on the generation conditions of primary high – Ca boninite magmas. J. Petrol 35: 1183-1211(1994).
33
35. Stewart E., Lamb W., Newman J. and Tikoff. B. The petrological and geochemical evolution of early forearc mantle lithosphere: an example from the Red Hills ultramafic massif, New Zealand. J. Petrol 57:751-776(2016).
34
36. Sun S.S., McDonough W.F. Chemical and isotopic systematic of oceanic basalts: implications for mantle composition and processes. In: Saunders A.D., Norry M.J.(eds) Magmatism in the Ocean Basins. Geol. Soc. Lon. Spec. Public 42: 313-345(1989).
35
37. Tamura A., Arai S., Andel E.S. Petrology and geochemistry of peridotites from TODP site U1309 at Atlantis massif. MAR 30N: micro- and macro- scale melt penetrations into peridotites. Contrib. mineral. Petrol 155(4): 491-509 (2008).
36
38. Uysal İ., Zaccarini F., Garuti G., Meisel T., Tarkian M., Bernhardt H.J. & Sadıklar M.B. Ophiolitic chromitites from the Kahramanmaraş area, southeastern Turkey: their platinum group elements (PGE) geochemistry, mineralogy and Os-isotope signature. Ofioliti 32: 151–161 (2007).
37
39. Xiao W., Han C., Chao Y., Sun M., Zhao G., Shan Y. Transitions among Mariana, -Japan-, Cordillera-, and Alaska-type systems and their final luxtapositions leading to accretionary and collisional orogenesis. In kusky, T.M., Zhai, M.G., Xiao, W. (Eds). The evolving continents under – standing processes of continental Grawth. Geol. Soc. Lond 338: 35-53(2010).
38
40. Zheng J.D., Griffin W.L., O Reilly S.Y., Yu C.M., Zhang H.F., Pearson N., Zhang M. Mechanism and timing of lithospheric modification and replacement beneath the eastern North Chaina Craton: Peridotitic xenoliths from the 100 Ma fuxin basalts and a regional synthesis. Geochim. Cosmachim. Ac 71: 5203-5225(2007).
39
ORIGINAL_ARTICLE
Diagnostic Measures in Ridge Regression Model with AR(1) Errors under the Stochastic Linear Restrictions
Outliers and influential observations have important effects on the regression analysis. The goal of this paper is to extend the mean-shift model for detecting outliers in case of ridge regression model in the presence of stochastic linear restrictions when the error terms follow by an autoregressive AR(1) process. Furthermore, extensions of measures for diagnosing influential observations are derived. A numerical example of a real data set is used to illustrate the findings. Finally, a simulation study is conducted to evaluate the performance of the proposed procedure and measures. Results of this study show the efficiency of the proposed mean-shift outlier model for the proposed model. Also, the study resulted in some findings about the behavior of suggested measures for the specified model. In fact, these measures are affected by the degree of collinearity and the size of autocorrelation.
https://jsciences.ut.ac.ir/article_64795_db39943b94dc78c3bb98470b3c5bb2e5.pdf
2018-01-30
67
78
10.22059/jsciences.2018.64795
Ridge regression
Stochastic linear rRestrictions
Autocorrelated error terms
Influential analysis
Mean-shift outlier model
A. Zaherzadeh
Zaherzadeh
1
Department of Statistics, Faculty of Mathematical Sciences and Computer, Shahid Chamran University of Ahvaz, Ahvaz, Islamic Republic of Iran
AUTHOR
A. R.
Rasekh
2
Department of Statistics, Faculty of Mathematical Sciences and Computer, Shahid Chamran University of Ahvaz, Ahvaz, Islamic Republic of Iran
LEAD_AUTHOR
B.
Babadi
3
Department of Statistics, Faculty of Mathematical Sciences and Computer, Shahid Chamran University of Ahvaz, Ahvaz, Islamic Republic of Iran
AUTHOR
1. Hoerl A.E. and Kennard R.W. Ridge regression: biased estimation for non-orthogonal problems. Technometrics, 12: 69–82 (1970).
1
2. Belsley D.A., Kuh E. and Welsch R.E. Regression diagnostics: identifying data and sources of collinearity. John Wiley & Sons, New York, (2004).
2
3. Rao C.R., Toutenburg H., Shalabh and Heumann C. Linear models and generalizations, Least squares and alternatives. Springer, Berlin, (2008).
3
4. Sarkar N. A new estimator combining the ridge regression and the restricted least squares methods of estimation. Commun. Stat.-Theor M, 21: 1987–2000 (1992).
4
5. Özkale M.R. A stochastic restricted ridge regression estimator. J. Multivar Anal., 100: 1706–1716 (2009).
5
6. Bayhan G.M. and Bayhan M. Forcasting using autocorrelated errors and multicollinear predictor variables. Comp. ind. Eng., 34(2): 413-421 (1998).
6
7. Alkhamisi M.A. Ridge estimation in linear models with autocorrelated errors. Commun. Stat.-Theor M, 39: 2630–2644 (2010).
7
8. Groβ J. Restricted ridge estimation. Stat. Probabil. Lett., 65: 57-64 (2003).
8
9. Alheety M.I. and Golam Kibria B.M. A Generalized stochastic restricted ridge regression estimator. Commun. Stat.-Theor M, 43: 4415–4427 (2014).
9
10. Chatterjee S. and Hadi A.S. Influential observations, high leverage points, and outliers in linear regression. Stat. Science, 1(3): 379–416 (1986).
10
11. Roy S.S. and Guria S. Regression diagnostics in an autocorrelated model. Braz. J. Probab. Statist., 18: 103–112 (2004).
11
12. Özkale M.R. and Acar T.S. Leverages and influential observations in a regression model with autocorrelated errors. Commun. Stat.-Theor M, 44: 2267–2290 (2015).
12
13. Acar T.S and Özkale M.R. Influence measures in ridge regression when the error terms follow an AR(1) process. Comput. Stat., 31(3): 879–898 (2016).
13
14. Ghapani F., Rasekh A.R., Akhoond M.R. and Babadi B. Detection of outliers and influential observations in linear ridge measurement error models with stochastic linear restrictions. J. Sci. I. R. Iran, 26(4): 355 - 366 (2015).
14
15. Wang J. Statistical diagnosis of linear regression model with the random constraints and Bayes method. Nanjing University of Science and Technology, Nanjing, (2007).
15
16. Wen H.W. and Wing K.F. The mean-shift outlier model in general weighted regression and its applications. Comp. Stat. data an., 33(4): 429-441 (1999).
16
17. Pan J. and Xiong H. Outliers and influential observations in a ridge mean shift regression, System science and Mathematical science, 9(1): 12-26 (1995).
17
18. Ghapani F., Rasekh A.R. and Babadi B. Mean shift and influence measures in linear measurement error models with stochastic linear restrictions. Comm. Stat-Simulat.C., 46(6): 4499-4512 (2017).
18
19. Theil H. and Goldberger A.S. On pure and mixed statistical estimation in economics. Int. Econ. Rev., 2 : 65-78 (1961).
19
20 Troskie C.G., Chalton D.O., Stewart T.J. and Jacobs M. Detection of outliers and influential observations in regression analysis using stochastic prior information, Commun. Stat.-Theor M, 23(12): 3453–3476 (1994).
20
21. Firinguetti L. A simulation study of ridge regression estimators with autocorrelated errors. Commun. Stat. Simulat., 18(2): 673-701 (1989).
21
22. Judge G.C., Hill R.C., Griffiths W.E., Lütkepohl H. and Lee T.C. Introduction to the Theory and Practice of Econometrics. John Wiley & Sons, New York, (1988).
22
23. Seber G.A.F. and Lee A. Linear Regression Analysis. John Wiley & Sons, New Jersey, (2003).
23
24. Montgomery D.C., Peck E.A., and Vining G.G. Linear Regression Analysis,5th Ed., John Wiley & Sons, New Jersey, (2012).
24
26. McDonald G.C. and Galarneau D.I. A monte carlo evaluation of some ridge type estimators. J. Am. Stat. Assoc., 70: 407–416 (1975).
25
ORIGINAL_ARTICLE
Bistability in the Electric Current through a Quantum-Dot Capacitively Coupled to a Charge-Qubit
We investigate the electronic transport through a single-level quantum-dot which is capacitively coupled to a charge-qubit. By employing the method of nonequilibrium Green's functions, we calculate the electric current through quantum dot at finite bias voltages. The Green's functions and self-energies of the system are calculated perturbatively and self-consistently to the second order of interaction between the quantum-dot and the charge-qubit by employing the Majorana fermion representation for isospin operators of the qubit. Our results show that in the particle-hole symmetric situation, the electric current of the QD exhibits a unitary linear conductance at low bias voltage and at the higher bias voltage it has a nonlinear dependence on the bias voltage. Moreover, we find that at some appropriate parameter regimes, the current through the QD as a function of gate voltage, at a fixed bias voltage shows bistability.
https://jsciences.ut.ac.ir/article_64796_f798121dc690cd5392a385fd6cf07e6e.pdf
2018-01-30
79
85
10.22059/jsciences.2018.64796
Nonequilibrium green's function method
Current bistability
Perturbation theory
Majorana fermion representation of spin operators
S. M.
Tabatabaei
1
Department of Applied Physics, Faculty of Physics, University of Shahid Beheshti, Evin, Tehran, Islamic Republic of Iran
LEAD_AUTHOR
Schuler B, Persson M, Paavilainen S, Pavliček N, Gross L, Meyer G, Repp J. Effect of electron-phonon interaction on the formation of one-dimensional electronic states in coupled Cl vacancies. Phys. Rev. B, 91(23):235443 (2015).
1
Zwanenburg FA, Dzurak AS, Morello A, Simmons MY, Hollenberg LC, Klimeck G, Rogge S, Coppersmith SN, Eriksson MA. Silicon quantum electronics. Rev. Mod. Phys., 85(3):961 (2013).
2
Han JE. Nonequilibrium electron transport in strongly correlated molecular junctions. Phys. Rev. B, 81(11): 113106 (2010).
3
Laird EA, Kuemmeth F, Steele GA, Grove-Rasmussen K, Nygård J, Flensberg K, Kouwenhoven LP. Quantum transport in carbon nanotubes. Rev. Mod. Phys., 87(3):703 (2015).
4
Chen SH, Chen CL, Chang CR, Mahfouzi F. Spin-charge conversion in a multiterminal Aharonov-Casher ring coupled to precessing ferromagnets: A charge-conserving Floquet nonequilibrium Green function approach. Phys. Rev. B,87(4):045402 (2013).
5
Bati M, Sakiroglu S, Sokmen I. Electron transport in electrically biased inverse parabolic double-barrier structure. Chinese Phys. B, 25(5):057307 (2016).
6
Kornich V, Kloeffel C, Loss D. Phonon-mediated decay of singlet-triplet qubits in double quantum dots. Phys. Rev. B, 89(8):085410 (2014).
7
Awschalom DD, Bassett LC, Dzurak AS, Hu EL, Petta JR. Quantum spintronics: engineering and manipulating atom-like spins in semiconductors. Science, 339(6124):1174-1179 (2013).
8
Viennot JJ, Dartiailh MC, Cottet A, Kontos T. Coherent coupling of a single spin to microwave cavity photons. Science, 349(6246):408-411 (2015).
9
Prabhakar S, Melnik R, Bonilla LL. Electrical control of phonon-mediated spin relaxation rate in semiconductor quantum dots: Rashba versus dresselhaus spin-orbit coupling. Phys. Rev. B, 87(23): 235202 (2013).
10
Muhonen JT, Dehollain JP, Laucht A, Hudson FE, Kalra R, Sekiguchi T, Itoh KM, Jamieson DN, McCallum JC, Dzurak AS, Morello A. Storing quantum information for 30 seconds in a nanoelectronic device. Nat. Nanotechnol., 9(12):986-991 (2014).
11
Bruchez M, Moronne M, Gin P, Weiss S, Alivisatos AP. Semiconductor nanocrystals as fluorescent biological labels. Science, 281(5385):2013-2016 (1998).
12
Li L, Wu G, Yang G, Peng J, Zhao J, Zhu JJ. Focusing on luminescent graphene quantum dots: current status and future perspectives. Nanoscale. 5(10):4015-4039 (2013).
13
Karwacki Ł, Trocha P, Barnaś J. Magnon transport through a quantum dot: Conversion to electronic spin and charge currents. Phys. Rev. B, 92(23):235449 (2015).
14
Eskandari-asl A. Bi-stability in single impurity Anderson model with strong electron–phonon interaction (polaron regime). Physica B, 497:11-13 (2016).
15
Makhlin Y, Schön G, Shnirman A. Quantum-state engineering with Josephson-junction devices. Rev. Mod. Phys., 73(2): 357 (2001).
16
Sprinzak D, Buks E, Heiblum M, Shtrikman H. Controlled dephasing of electrons via a phase sensitive detector. Phys. Rev. Lett., 84(25): 5820 (2000).
17
Makhlin Y, Schön G, Shnirman A. Statistics and noise in a quantum measurement process. Phys. Rev. Lett., 85(21): 4578 (2000).
18
Korotkov AN. Selective quantum evolution of a qubit state due to continuous measurement. Phys. Rev. B, 63(11): 115403 (2001).
19
Gurvitz SA, Berman GP. Single qubit measurements with an asymmetric single-electron transistor. Phys. Rev. B, 72(7): 073303 (2005).
20
Gurvitz SA, Mozyrsky D. Quantum mechanical approach to decoherence and relaxation generated by fluctuating environment. Phys. Rev. B, 77(7): 075325 (2008).
21
Shnirman A, Schoen G. Quantum measurements performed with a single-electron transistor. Phys. Rev. B, 57(24): 15400 (1998).
22
Mozyrsky D, Martin I, Hastings MB. Quantum-limited sensitivity of single-electron-transistor-based displacement detectors. Phys. Rev. Lett., 92(1): 018303 (2004).
23
Oxtoby NP, Wiseman HM, Sun HB. Sensitivity and back action in charge qubit measurements by a strongly coupled single-electron transistor. Phys. Rev. B, 74(4): 045328 (2006).
24
Schulenborg J, Splettstoesser J, Governale M, Contreras-Pulido LD. Detection of the relaxation rates of an interacting quantum dot by a capacitively coupled sensor dot. Phys. Rev. B, 89(19): 195305 (2014).
25
Hell M, Wegewijs MR, DiVincenzo DP. Coherent backaction of quantum dot detectors: Qubit isospin precession. Phys. Rev. B, 89(19): 195405 (2014).
26
Hell M, Wegewijs MR, DiVincenzo DP. Qubit quantum-dot sensors: Noise cancellation by coherent backaction, initial slips, and elliptical precession. Phys. Rev. B, 93(4): 045418 (2016).
27
Tabatabaei SM. Perturbative approach to the capacitive interaction between a sensor quantum dot and a charge qubit. Phys. Rev. B, 95(15): 155113 (2017).
28
Simine L, Segal D. Electron transport in nanoscale junctions with local anharmonic modes. J. Chem. Phys., 141(1): 014704 (2014).
29
Hamo A, Benyamini A, Shapir I, Khivrich I, Waissman J, Kaasbjerg K, Oreg Y, von Oppen F, Ilani S. Electron attraction mediated by coulomb repulsion. Nature, 535(7612):395-400 (2016).
30
Bulla R., Costi T. and Pruschke T. Numerical renormalization group method for quantum impurity systems. Rev. Mod. Phys., 80(2): 395 (2008).
31
Liu YY, Petersson KD, Stehlik J, Taylor JM, Petta JR. Photon emission from a cavity-coupled double quantum dot. Phys. Rev. Lett., 113(3): 036801 (2014).
32
Schad P, Shnirman A, Makhlin Y. Using Majorana spin-1/2 representation for the spin-boson model. Phys. Rev. B, 93(17): 174420 (2016).
33
Schad P, Makhlin Y, Narozhny BN, Schön G, Shnirman A. Majorana representation for dissipative spin systems. Ann. Phys., 361: 401-422 (2015).
34
Stefanucci G. and van Leeuwen R. Nonequilibrium Many-Body Theory of Quantum Systems: A Modern Introduction, Camb. Univ. Press (2013).
35
Zitko R. The package is available at http://nrgljubljana. ijs.si.
36